Transcript: lnc-TPCN2-5:4

Basic information

LNCipedia transcript ID: lnc-TPCN2-5:4 
LNCipedia gene ID: lnc-TPCN2-5
Location (hg19): chr11:68923405-68924526
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1122 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259799.1|FTMT24400003216.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.5002 non-coding 
CPAT coding probability 3.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPCN2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TPCN2-5:4
5.0 lnc-TPCN2-5:4
5.1 lnc-TCIRG1-24:2
5.2 lnc-TPCN2-5:4