Transcript: lnc-TPD52-5:2

Basic information

LNCipedia transcript ID: lnc-TPD52-5:2 
LNCipedia gene ID: lnc-TPD52-5
Location (hg19): chr8:81215192-81220555
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 401 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015050; NONHSAT127408
Alternative gene names: XLOC_007131; linc-TPD52-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 17.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPD52-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPD52-1:2
3.1 lnc-TPD52-1:1
4.0 lnc-TPD52-1:1
4.1 lnc-TPD52-1:1
5.0 lnc-TPD52-1:1
5.1 lnc-CPA6-136:2
5.2 lnc-TPD52-5:2