Transcript: lnc-TPP1-2:4

Basic information

LNCipedia transcript ID: lnc-TPP1-2:4 
LNCipedia gene ID: lnc-TPP1-2
Location (hg19): chr11:6632419-6633770
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 502 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT017743
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -335.3848 non-coding 
CPAT coding probability 58.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TPP1-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPP1-1:2
4.0 lnc-TAF10-1:3
4.1 lnc-TAF10-1:3
5.0 lnc-TAF10-1:3
5.1 lnc-CAVIN3-20:4
5.2 lnc-TPP1-2:4