Transcript: lnc-TRABD2A-5:8

Basic information

LNCipedia transcript ID: lnc-TRABD2A-5:8 
LNCipedia gene ID: lnc-TRABD2A-5
Location (hg19): chr2:85185108-85197804
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 11661 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000049205.1|MICT00000192869.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.5556 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRABD2A-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C2orf89-5:8
5.0 lnc-C2orf89-5:8
5.1 lnc-ZNF514-167:8
5.2 lnc-TRABD2A-5:8