Transcript: lnc-TRAPPC12-5:2

Basic information

LNCipedia transcript ID: lnc-TRAPPC12-5:2 
LNCipedia gene ID: lnc-TRAPPC12-5
Location (hg19): chr2:3183975-3185168
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1068 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT068707
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.5704 non-coding 
CPAT coding probability 95.75% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRAPPC12-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRAPPC12-5:2
4.0 lnc-TRAPPC12-5:2
4.1 lnc-TRAPPC12-5:2
5.0 lnc-TRAPPC12-5:2
5.1 lnc-SNX17-266:2
5.2 lnc-TRAPPC12-5:2