Transcript: lnc-TREML2-4:4

Basic information

LNCipedia transcript ID: lnc-TREML2-4:4 
LNCipedia gene ID: lnc-TREML2-4
Location (hg19): chr6:41239237-41239747
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 511 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000088287.1|HBMT00001252737.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -170.5061 non-coding 
CPAT coding probability 2.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TREML2-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TREM1-4:1
5.0 lnc-TREM1-4:1
5.1 lnc-TREML2-6:1
5.2 lnc-TREML2-4:4