Transcript: lnc-TRIB1-4:3

Basic information

LNCipedia transcript ID: lnc-TRIB1-4:3 
LNCipedia gene ID: lnc-TRIB1-4
Location (hg19): chr8:127336181-127344824
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2935 bp
Exons: 6
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT128993; FPKM1_group_32182_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.2346 non-coding 
CPAT coding probability 2.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIB1-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIB1-4:3
4.0 lnc-TRIB1-4:3
4.1 lnc-TRIB1-4:3
5.0 lnc-TRIB1-4:3
5.1 lnc-NSMCE2-10:1
5.2 lnc-TRIB1-4:3