Transcript: lnc-TRIM28-12:3

Basic information

LNCipedia transcript ID: lnc-TRIM28-12:3 
LNCipedia gene ID: lnc-TRIM28-12
Location (hg19): chr19:59097652-59100861
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 412 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT068469
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.7116 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM28-12:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM28-1:11
4.0 lnc-TRIM28-12:3
4.1 lnc-TRIM28-12:3
5.0 lnc-TRIM28-12:3
5.1 lnc-ZNF587B-56:3
5.2 lnc-TRIM28-12:3