Transcript: lnc-TRIM28-13:1

Basic information

LNCipedia transcript ID: lnc-TRIM28-13:1 
LNCipedia gene ID: lnc-TRIM28-13
Location (hg19): chr19:59070048-59070424
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 377 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267858.1|HBMT00000722020.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM28-13:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MZF1-AS1:7
5.0 MZF1-AS1:7
5.1 lnc-ZNF587B-55:1
5.2 lnc-TRIM28-13:1