Transcript: lnc-TRIM49B-7:2

Basic information

LNCipedia transcript ID: lnc-TRIM49B-7:2 
LNCipedia gene ID: lnc-TRIM49B-7
Location (hg19): chr11:49387623-49401221
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 578 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT021313
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 367.544 coding 
CPAT coding probability 4.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRIM49B-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC084851.1-7:2
4.0 lnc-AC084851.1-7:2
4.1 lnc-AC084851.1-7:2
5.0 lnc-AC084851.1-7:2
5.1 lnc-OR5L2-29:2
5.2 lnc-TRIM49B-7:2