Transcript: lnc-TRIM74-2:2

Basic information

LNCipedia transcript ID: lnc-TRIM74-2:2 
LNCipedia gene ID: lnc-TRIM74-2
Location (hg19): chr7:72394956-72395554
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 599 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272843.1|ENST00000608799.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.3691 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM74-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TRIM74-2:2
5.0 lnc-TRIM74-2:2
5.1 lnc-TRIM74-2:2
5.2 lnc-TRIM74-2:2