Transcript: lnc-TRIM77-7:2

Basic information

LNCipedia transcript ID: lnc-TRIM77-7:2 
LNCipedia gene ID: lnc-TRIM77-7
Location (hg19): chr11:89510149-89515545
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1342 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT023564
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.1567 non-coding 
CPAT coding probability 74.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRIM77-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM49L2-7:1
4.0 lnc-TRIM49L2-7:1
4.1 lnc-TRIM49L2-7:1
5.0 lnc-TRIM49L2-7:1
5.1 lnc-TRIM77-7:1
5.2 lnc-TRIM77-7:2