Transcript: lnc-TRIO-7:1

Basic information

LNCipedia transcript ID: lnc-TRIO-7:1 
LNCipedia gene ID: lnc-TRIO-7
Location (hg19): chr5:13623136-13623522
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 279 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT100527; FPKM1_group_24992_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -353.2148 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIO-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIO-7:1
4.0 lnc-TRIO-7:1
4.1 lnc-TRIO-7:1
5.0 lnc-TRIO-7:1
5.1 lnc-CARD6-232:1
5.2 lnc-TRIO-7:1