Transcript: lnc-TRIQK-2:7

Basic information

LNCipedia transcript ID: lnc-TRIQK-2:7 
LNCipedia gene ID: lnc-TRIQK-2
Ensembl Gene ID: ENSG00000248858
Ensembl Transcript ID: ENST00000521230
Location (hg19): chr8:93711970-93770770
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 407 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000521230.1; RP11-100L22.2-003; OTTHUMT00000377515.1; NONHSAT147651; ENST00000521230.5
Alternative gene names: ENSG00000248858.2; RP11-100L22.2; OTTHUMG00000164159.1; ENSG00000248858.3; ENSG00000248858.7; FLJ46284; AC104211.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.4475 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIQK-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf83-2:4
4.0 lnc-C8orf83-2:4
4.1 lnc-C8orf83-2:4
5.0 lnc-C8orf83-2:4
5.1 lnc-ZNF706-185:7
5.2 lnc-TRIQK-2:7