Transcript: lnc-TRPC4AP-1:1

Basic information

LNCipedia transcript ID: lnc-TRPC4AP-1:1 
LNCipedia gene ID: lnc-TRPC4AP-1
Location (hg19): chr20:33576717-33578944
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1069 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT079463
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.8695 non-coding 
CPAT coding probability 15.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRPC4AP-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRPC4AP-1:1
4.0 lnc-TRPC4AP-1:1
4.1 lnc-TRPC4AP-1:1
5.0 lnc-TRPC4AP-1:1
5.1 lnc-MMP24OS-11:1
5.2 lnc-TRPC4AP-1:1