Transcript: lnc-TRUB2-5:1

Basic information

LNCipedia transcript ID: lnc-TRUB2-5:1 
LNCipedia gene ID: lnc-TRUB2-5
Location (hg19): chr9:131067440-131067794
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 355 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608252.1
Alternative gene names: ENSG00000272960.1; RP11-339B21.15


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.7575 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRUB2-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRUB2-5:1
4.0 lnc-TRUB2-5:1
4.1 lnc-TRUB2-5:1
5.0 lnc-TRUB2-5:1
5.1 lnc-SPOUT1-19:1
5.2 lnc-TRUB2-5:1