Transcript: lnc-TRUB2-7:1

Basic information

LNCipedia transcript ID: lnc-TRUB2-7:1 
LNCipedia gene ID: lnc-TRUB2-7
Location (hg19): chr9:131141591-131143391
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1622 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_3860_chr9:131141590-131142765_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.0641 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRUB2-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRUB2-7:1
4.0 lnc-TRUB2-7:1
4.1 lnc-TRUB2-7:1
5.0 lnc-TRUB2-7:1
5.1 lnc-SPOUT1-14:1
5.2 lnc-TRUB2-7:1