Transcript: lnc-TSKU-1:2

Basic information

LNCipedia transcript ID: lnc-TSKU-1:2 
LNCipedia gene ID: lnc-TSKU-1
Location (hg19): chr11:76512704-76515138
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2435 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT023193
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.1169 non-coding 
CPAT coding probability 12.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSKU-1:2 no no no no

Available literature

  1. Zhou (2015), A potential signature of eight long non-coding RNAs predicts survival in patients with non-small cell lung cancer., J Transl Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSKU-1:2
4.0 lnc-TSKU-1:2
4.1 lnc-TSKU-1:2
5.0 lnc-TSKU-1:2
5.1 lnc-DDIAS-64:3
5.2 lnc-TSKU-1:2