Transcript: lnc-TSPYL5-5:1

Basic information

LNCipedia transcript ID: lnc-TSPYL5-5:1 
LNCipedia gene ID: lnc-TSPYL5-5
Location (hg19): chr8:98652892-98656310
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3419 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000103325.1|ENCT00000438355.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.2581 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPYL5-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSPYL5-5:1
5.0 lnc-TSPYL5-5:1
5.1 lnc-ZNF706-108:1
5.2 lnc-TSPYL5-5:1