Transcript: lnc-TSPYL5-6:1

Basic information

LNCipedia transcript ID: lnc-TSPYL5-6:1 
LNCipedia gene ID: lnc-TSPYL5-6
Location (hg19): chr8:97787164-97805646
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 649 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT127866
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.0611 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPYL5-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KB-1448A5.1.1-3:1
4.0 lnc-KB-1448A5.1.1-3:1
4.1 lnc-KB-1448A5.1.1-3:1
5.0 lnc-KB-1448A5.1.1-3:1
5.1 lnc-ZNF706-121:1
5.2 lnc-TSPYL5-6:1