Transcript: lnc-TSSK1B-1:1

Basic information

LNCipedia transcript ID: lnc-TSSK1B-1:1 
LNCipedia gene ID: lnc-TSSK1B-1
Location (hg19): chr5:112783820-112824520
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 744 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT103267
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 157.3689 coding 
CPAT coding probability 77.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TSSK1B-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSSK1B-1:1
4.0 lnc-TSSK1B-1:1
4.1 lnc-TSSK1B-1:1
5.0 lnc-TSSK1B-1:1
5.1 lnc-LOX-121:1
5.2 lnc-TSSK1B-1:1