Transcript: lnc-TSSK4-3:2

Basic information

LNCipedia transcript ID: lnc-TSSK4-3:2 
LNCipedia gene ID: lnc-TSSK4-3
Location (hg19): chr14:24664933-24672906
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7974 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000018320.1|ENCT00000123373.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.432 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSSK4-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSSK4-3:2
5.0 lnc-TSSK4-3:2
5.1 lnc-PABPN1-34:1
5.2 lnc-TSSK4-3:2