Transcript: lnc-TSTD2-4:2

Basic information

LNCipedia transcript ID: lnc-TSTD2-4:2 
LNCipedia gene ID: lnc-TSTD2-4
Location (hg19): chr9:100153119-100158973
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2017 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT133504; NR_026847
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.2561 non-coding 
CPAT coding probability 1.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSTD2-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSTD2-4:2
4.0 lnc-TSTD2-4:2
4.1 lnc-TSTD2-4:2
5.0 lnc-TSTD2-4:2
5.1 lnc-FANCC-49:2
5.2 lnc-TSTD2-4:2