Transcript: lnc-TTC21B-2:4

Basic information

LNCipedia transcript ID: lnc-TTC21B-2:4 
LNCipedia gene ID: lnc-TTC21B-2
RefSeq ID: NR_045375
Location (hg19): chr2:166713985-166728451
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1597 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_045375.2
Alternative gene names: LOC100506124


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -131.8182 non-coding 
CPAT coding probability 2.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC21B-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SCN9A-7:2
5.1 lnc-SCN9A-7:2
5.2 lnc-TTC21B-2:4