Transcript: lnc-TTC28-2:2

Basic information

LNCipedia transcript ID: lnc-TTC28-2:2 
LNCipedia gene ID: lnc-TTC28-2
Location (hg19): chr22:28306436-28315232
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 766 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT084605
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 815.4336 coding 
CPAT coding probability 36.63% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TTC28-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTC28-2:2
4.0 lnc-TTC28-2:2
4.1 lnc-TTC28-2:2
5.0 lnc-TTC28-2:2
5.1 lnc-PLA2G3-37:2
5.2 lnc-TTC28-2:2