Transcript: lnc-TTC30B-1:17

Basic information

LNCipedia transcript ID: lnc-TTC30B-1:17 
LNCipedia gene ID: lnc-TTC30B-1
Location (hg19): chr2:178156161-178257419
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 32003 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000213963.2|ENCT00000250434.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.5176 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC30B-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TTC30B-1:17
5.0 lnc-TTC30B-1:17
5.1 lnc-SESTD1-24:7
5.2 lnc-TTC30B-1:17