Transcript: lnc-TTC30B-1:7

Basic information

LNCipedia transcript ID: lnc-TTC30B-1:7 
LNCipedia gene ID: lnc-TTC30B-1
RefSeq ID: NR_026966
Location (hg19): chr2:178148236-178257419
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5206 bp
Exons: 9
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT075710; NR_026966; NR_026966.1
Alternative gene names: LOC100130691


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8621 non-coding 
CPAT coding probability 16.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC30B-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTC30B-1:7
4.0 lnc-TTC30B-1:7
4.1 lnc-TTC30B-1:7
5.0 lnc-TTC30B-1:7
5.1 lnc-SESTD1-24:3
5.2 lnc-TTC30B-1:7