Transcript: lnc-TTLL10-3:2

Basic information

LNCipedia transcript ID: lnc-TTLL10-3:2 
LNCipedia gene ID: lnc-TTLL10-3
Ensembl Gene ID: ENSG00000272141
Ensembl Transcript ID: ENST00000606993
Location (hg19): chr1:1104737-1105723
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 987 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606993.1
Alternative gene names: ENSG00000272141.1; RP11-465B22.8; AL390719.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.9077 non-coding 
CPAT coding probability 53.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TTLL10-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTLL10-3:2
4.0 lnc-TTLL10-3:2
4.1 lnc-TTLL10-3:2
5.0 lnc-TTLL10-3:2
5.1 lnc-VAMP3-112:9
5.2 lnc-TTLL10-3:2