Transcript: lnc-TUBA3C-11:2

Basic information

LNCipedia transcript ID: lnc-TUBA3C-11:2 
LNCipedia gene ID: lnc-TUBA3C-11
Location (hg19): chr13:19564545-19565801
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 622 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_7446_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.0268 non-coding 
CPAT coding probability 3.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBA3C-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUBA3C-11:2
4.0 lnc-TUBA3C-11:2
4.1 lnc-TUBA3C-11:2
5.0 lnc-TUBA3C-11:2
5.1 lnc-ZDHHC20-55:2
5.2 lnc-TUBA3C-11:2