Transcript: lnc-TUBA3C-9:5

Basic information

LNCipedia transcript ID: lnc-TUBA3C-9:5 
LNCipedia gene ID: lnc-TUBA3C-9
Location (hg19): chr13:19622134-19625817
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 972 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT032248
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.0307 non-coding 
CPAT coding probability 91.85% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TUBA3C-9:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUBA3C-9:5
4.0 lnc-TUBA3C-9:5
4.1 lnc-TUBA3C-9:5
5.0 lnc-TUBA3C-9:5
5.1 lnc-ZDHHC20-52:6
5.2 lnc-TUBA3C-9:5