Transcript: lnc-TUBA3E-1:5

Basic information

LNCipedia transcript ID: lnc-TUBA3E-1:5 
LNCipedia gene ID: lnc-TUBA3E-1
Location (hg19): chr2:130913619-130915189
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 547 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT074284
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -213.6711 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBA3E-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUBA3E-1:5
4.0 lnc-TUBA3E-1:5
4.1 lnc-TUBA3E-1:5
5.0 lnc-TUBA3E-1:5
5.1 lnc-CCDC115-5:2
5.2 lnc-TUBA3E-1:5