Transcript: lnc-TUBB2A-9:1

Basic information

LNCipedia transcript ID: lnc-TUBB2A-9:1 
LNCipedia gene ID: lnc-TUBB2A-9
Location (hg19): chr6:3104657-3118831
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3369 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000087173.1|ENCT00000381180.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.3457 non-coding 
CPAT coding probability 9.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBB2A-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TUBB2A-9:1
5.0 lnc-TUBB2A-9:1
5.1 lnc-ECI2-78:1
5.2 lnc-TUBB2A-9:1