Transcript: lnc-TUBB2A-9:2

Basic information

LNCipedia transcript ID: lnc-TUBB2A-9:2 
LNCipedia gene ID: lnc-TUBB2A-9
Location (hg19): chr6:3112391-3118602
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 778 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000087173.1|MICT00000296094.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.0066 non-coding 
CPAT coding probability 8.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBB2A-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TUBB2A-9:2
5.0 lnc-TUBB2A-9:2
5.1 lnc-ECI2-78:4
5.2 lnc-TUBB2A-9:2