Transcript: lnc-TUBGCP3-4:4

Basic information

LNCipedia transcript ID: lnc-TUBGCP3-4:4 
LNCipedia gene ID: lnc-TUBGCP3-4
Location (hg19): chr13:112925472-112926760
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 332 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00022317
Alternative gene names: XLOC_010732; linc-ANKRD10-10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.8903 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBGCP3-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TUBGCP3-3:4
3.1 lnc-TUBGCP3-4:4
4.0 lnc-TUBGCP3-4:4
4.1 lnc-TUBGCP3-4:4
5.0 lnc-TUBGCP3-4:4
5.1 lnc-DCUN1D2-17:6
5.2 lnc-TUBGCP3-4:4