Transcript: lnc-TUBGCP6-5:7

Basic information

LNCipedia transcript ID: lnc-TUBGCP6-5:7 
LNCipedia gene ID: lnc-TUBGCP6-5
Location (hg19): chr22:50637519-50639262
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 997 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273253.1|ENST00000608025.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.8264 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUBGCP6-5:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TUBGCP6-5:7
5.0 lnc-TUBGCP6-5:7
5.1 lnc-HDAC10-5:6
5.2 lnc-TUBGCP6-5:7