Transcript: lnc-TUFM-3:2

Basic information

LNCipedia transcript ID: lnc-TUFM-3:2 
LNCipedia gene ID: lnc-TUFM-3
Location (hg19): chr16:28832361-28834413
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2053 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT141528
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7889 non-coding 
CPAT coding probability 2.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TUFM-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUFM-3:2
4.0 lnc-TUFM-3:2
4.1 lnc-TUFM-3:2
5.0 lnc-TUFM-3:2
5.1 lnc-SULT1A2-9:3
5.2 lnc-TUFM-3:2