Transcript: lnc-U2AF1-1:4

Basic information

LNCipedia transcript ID: lnc-U2AF1-1:4 
LNCipedia gene ID: lnc-U2AF1-1
Location (hg19): chr21:44513066-44516500
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3344 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT082375
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 701.0678 coding 
CPAT coding probability 43.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-U2AF1-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-U2AF1-1:4
4.0 lnc-U2AF1-1:4
4.1 lnc-U2AF1-1:4
5.0 lnc-U2AF1-1:4
5.1 lnc-POFUT2-44:4
5.2 lnc-U2AF1-1:4