Transcript: lnc-U2SURP-3:4

Basic information

LNCipedia transcript ID: lnc-U2SURP-3:4 
LNCipedia gene ID: lnc-U2SURP-3
Location (hg19): chr3:142654983-142661362
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1358 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006995; NONHSAT092500
Alternative gene names: XLOC_002845; linc-SR140-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.9276 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-U2SURP-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-U2SURP-2:4
3.1 lnc-U2SURP-3:4
4.0 lnc-U2SURP-3:4
4.1 lnc-U2SURP-3:4
5.0 lnc-U2SURP-3:4
5.1 lnc-PXYLP1-24:12
5.2 lnc-U2SURP-3:4