Transcript: lnc-UAP1L1-1:2

Basic information

LNCipedia transcript ID: lnc-UAP1L1-1:2 
LNCipedia gene ID: lnc-UAP1L1-1
Ensembl Gene ID: ENSG00000231864
Ensembl Transcript ID: ENST00000456356
Location (hg19): chr9:139957987-139959033
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 748 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT135666; ENST00000456356.2
Alternative gene names: ENSG00000231864.2; RP11-229P13.23; AL807752.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 41.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UAP1L1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UAP1L1-1:2
4.0 lnc-UAP1L1-1:2
4.1 lnc-UAP1L1-1:2
5.0 lnc-UAP1L1-1:2
5.1 lnc-GPSM1-42:2
5.2 lnc-UAP1L1-1:2