Transcript: lnc-UBAP1-6:2

Basic information

LNCipedia transcript ID: lnc-UBAP1-6:2 
LNCipedia gene ID: lnc-UBAP1-6
Location (hg19): chr9:34048964-34050774
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1811 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000222259.1|MICT00000357432.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.4468 non-coding 
CPAT coding probability 8.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBAP1-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UBAP1-6:2
5.0 lnc-UBAP1-6:2
5.1 lnc-RECK-49:1
5.2 lnc-UBAP1-6:2