Transcript: lnc-UBLCP1-10:1

Basic information

LNCipedia transcript ID: lnc-UBLCP1-10:1 
LNCipedia gene ID: lnc-UBLCP1-10
Location (hg19): chr5:158460034-158471584
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3712 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: l_3045_chr5:158460033-158468568_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.102 non-coding 
CPAT coding probability 4.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBLCP1-10:1
4.0 lnc-UBLCP1-10:1
4.1 lnc-UBLCP1-10:1
5.0 lnc-UBLCP1-10:1
5.1 lnc-MRPL22-34:1
5.2 lnc-UBLCP1-10:1