Transcript: lnc-UBLCP1-10:2

Basic information

LNCipedia transcript ID: lnc-UBLCP1-10:2 
LNCipedia gene ID: lnc-UBLCP1-10
Location (hg19): chr5:158460268-158477064
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2664 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003lxm_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.1526 non-coding 
CPAT coding probability 12.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-10:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBLCP1-10:2
4.0 lnc-UBLCP1-10:2
4.1 lnc-UBLCP1-10:2
5.0 lnc-UBLCP1-10:2
5.1 lnc-MRPL22-34:2
5.2 lnc-UBLCP1-10:2