Transcript: lnc-UBLCP1-2:20

Basic information

LNCipedia transcript ID: lnc-UBLCP1-2:20 
LNCipedia gene ID: lnc-UBLCP1-2
Location (hg19): chr5:159003854-159012827
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 521 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00010823
Alternative gene names: XLOC_004621; linc-ADRA1B-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.3874 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-2:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UBLCP1-5:2
3.1 lnc-UBLCP1-8:2
4.0 lnc-UBLCP1-8:2
4.1 lnc-UBLCP1-2:20
5.0 lnc-UBLCP1-2:20
5.1 lnc-MRPL22-39:23
5.2 lnc-UBLCP1-2:20