Transcript: lnc-UBLCP1-2:23

Basic information

LNCipedia transcript ID: lnc-UBLCP1-2:23 
LNCipedia gene ID: lnc-UBLCP1-2
Ensembl Gene ID: ENSG00000249738
Ensembl Transcript ID: ENST00000641150
Location (hg19): chr5:158758947-158843632
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 633 bp
Exons: 5
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641150.1
Alternative gene names: ENSG00000249738.9; AC008691.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.6878 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-2:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MRPL22-39:15
5.1 lnc-MRPL22-39:15
5.2 lnc-UBLCP1-2:23