Transcript: lnc-UBXN4-6:1

Basic information

LNCipedia transcript ID: lnc-UBXN4-6:1 
LNCipedia gene ID: lnc-UBXN4-6
Location (hg19): chr2:136472725-136479273
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 436 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1958_chr2:136472724-136479273_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.9974 non-coding 
CPAT coding probability 2.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBXN4-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBXN4-6:1
4.0 lnc-UBXN4-6:1
4.1 lnc-UBXN4-6:1
5.0 lnc-UBXN4-6:1
5.1 lnc-GPR17-103:1
5.2 lnc-UBXN4-6:1