Transcript: lnc-UFSP1-2:1

Basic information

LNCipedia transcript ID: lnc-UFSP1-2:1 
LNCipedia gene ID: lnc-UFSP1-2
Location (hg19): chr7:100471480-100472566
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1087 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000096622.1|FTMT22600005418.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.7704 non-coding 
CPAT coding probability 2.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UFSP1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UFSP1-2:1
5.0 lnc-UFSP1-2:1
5.1 lnc-VGF-14:1
5.2 lnc-UFSP1-2:1