Transcript: lnc-ULBP3-1:1

Basic information

LNCipedia transcript ID: lnc-ULBP3-1:1 
LNCipedia gene ID: lnc-ULBP3-1
Location (hg19): chr6:150642054-150643510
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 265 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012332; NONHSAT115537
Alternative gene names: XLOC_005877; linc-ULBP3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.3475 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ULBP3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ULBP3-1:1
3.1 lnc-ULBP3-1:1
4.0 lnc-ULBP3-1:1
4.1 lnc-ULBP3-1:1
5.0 lnc-ULBP3-1:1
5.1 lnc-RAET1G-12:1
5.2 lnc-ULBP3-1:1