Transcript: lnc-ULK4-6:1

Basic information

LNCipedia transcript ID: lnc-ULK4-6:1 
LNCipedia gene ID: lnc-ULK4-6
Location (hg19): chr3:40503867-40508645
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 768 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005763; NONHSAT089167
Alternative gene names: XLOC_003092; linc-CX3CR1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.9784 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ULK4-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ULK4-6:1
3.1 lnc-ULK4-6:1
4.0 lnc-ULK4-6:1
4.1 lnc-ULK4-6:1
5.0 lnc-ULK4-6:1
5.1 lnc-SEC22C-25:1
5.2 lnc-ULK4-6:1