Transcript: lnc-UNC13C-2:1

Basic information

LNCipedia transcript ID: lnc-UNC13C-2:1 
LNCipedia gene ID: lnc-UNC13C-2
Location (hg19): chr15:53375036-53393040
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 346 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00023943
Alternative gene names: XLOC_011259; linc-UNC13C-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.5478 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UNC13C-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UNC13C-1:1
3.1 lnc-UNC13C-2:1
4.0 lnc-UNC13C-2:1
4.1 lnc-UNC13C-2:1
5.0 lnc-UNC13C-2:1
5.1 lnc-CCNDBP1-135:2
5.2 lnc-UNC13C-2:1