Transcript: lnc-UNCX-3:25

Basic information

LNCipedia transcript ID: lnc-UNCX-3:25 
LNCipedia gene ID: lnc-UNCX-3
Location (hg19): chr7:1200098-1203127
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 803 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229043.2|ENST00000413706.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.3458 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UNCX-3:25 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UNCX-3:25
5.0 lnc-UNCX-3:25
5.1 lnc-GPER1-8:18
5.2 lnc-UNCX-3:25